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Manuals
These manuals are outdated. More up-to-date versions can be found
here
.
R Basics Manual
BioConductor Manual
NGS Analysis with R/Bioconductor
NGS Analysis with Galaxy and IGV
Programming in R
Vim-R-Tmux: Command-Line IDE for R
ChemmineR
EMBOSS
Linux Essentials
IIGB's Linux Cluster Manual